Assay name​
HS_OPTN_1363955 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for OPTN
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
OPTN
Gene aliases​
FIP2;HYPL;FIP-2;TFIIIA-INTP;NRP;HIP7;GLC1E
Species​
Homo sapiens
Main target​
ENST00000430081
Exons numbers​
4-5
Ensembl exons ids​
ENSE00003748237;ENSE00001735692
Amplicon start​
771
Amplicon length​
64
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000263036
Protein coding
CCDS7094
Chr.10: 13099449 - 13136923
ENST00000378747
Protein coding
CCDS7094
NM_001008212
Chr.10: 13100163 - 13138308
ENST00000378748
Protein coding
CCDS7094
NM_001008211;NM_001008213
Chr.10: 13100173 - 13138291
ENST00000378752
Protein coding
Chr.10: 13100173 - 13138291
ENST00000378757
Protein coding
CCDS7094
NM_021980
Chr.10: 13100169 - 13138308
ENST00000378764
Protein coding
Chr.10: 13099603 - 13137129
ENST00000430081
Nonsense mediated decay
Chr.10: 13100173 - 13116327
ENST00000482140
Nonsense mediated decay
Chr.10: 13100163 - 13118980
ENST00000486862
Protein coding
Chr.10: 13112487 - 13116540