Assay name​
HS_PATJ_1860862 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for PATJ
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
PATJ
Gene aliases​
Cipp;INADL
Species​
Homo sapiens
Main target​
ENST00000646453
Exons numbers​
2-3
Ensembl exons ids​
ENSE00003661259;ENSE00003460325
Amplicon start​
520
Amplicon length​
122
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000307297
Protein coding
Chr.1: 61952312 - 62117393
ENST00000371158
Protein coding
CCDS617
NM_176877
Chr.1: 61742477 - 62163920
ENST00000459752
Retained intron
Chr.1: 61742477 - 62114910
ENST00000484562
Retained intron
Chr.1: 61742477 - 62114925
ENST00000484937
Nonsense mediated decay
Chr.1: 61805510 - 62163504
ENST00000635023
Nonsense mediated decay
Chr.1: 61742545 - 62114767
ENST00000635137
Protein coding
Chr.1: 61952075 - 62178675
ENST00000635214
Retained intron
Chr.1: 61742477 - 62114250
ENST00000642238
Protein coding
CCDS85980
NM_001350145
Chr.1: 61742406 - 62163950
ENST00000646453
Protein coding
Chr.1: 61952053 - 62163950