Assay name​
MM_OTX2_2000230 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for Otx2
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
Otx2
Species​
Mus musculus
Main target​
ENSMUST00000119739
Exons numbers​
2-3
Ensembl exons ids​
ENSMUSE00000403107;ENSMUSE00000720495
Amplicon start​
377
Amplicon length​
139
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000118578
Protein coding
CCDS49473
NM_001286483
Chr.14: 48657679 - 48665106
ENSMUST00000119070
Protein coding
CCDS70575
NM_001286481
Chr.14: 48658171 - 48667513
ENSMUST00000119739
Protein coding
Chr.14: 48661408 - 48665521
ENSMUST00000122009
Protein coding
CCDS49473
NM_144841
Chr.14: 48658171 - 48662872
ENSMUST00000133479
Protein coding
Chr.14: 48661358 - 48667508
ENSMUST00000144465
Protein coding
Chr.14: 48659305 - 48667508
ENSMUST00000152018
Protein coding
Chr.14: 48658953 - 48667644
ENSMUST00000226501
Protein coding
CCDS49473
NM_001286482
Chr.14: 48657677 - 48667515
ENSMUST00000227404
Protein coding
CCDS49473
Chr.14: 48657851 - 48673819