Assay name
HS_PPARGC1A_1892758 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR and dPCR wet-lab validated
Assay specification
Best coverage assay for PPARGC1A
Best transcript assay for ENST00000506055
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Best transcript assay for ENST00000506055
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR and dPCR.
Assay in Focus Panel
Gene symbol
PPARGC1A
Gene aliases
PGC1;PGC1A;PGC-1alpha;PPARGC1
Species
Homo sapiens
Main target
ENST00000506055
Exons numbers
1-2
Ensembl exons ids
ENSE00002031682;ENSE00003600993
Amplicon start
108
Amplicon length
87
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000264867
Protein coding
CCDS3429
NM_001354827;NM_001354825;NM_001330752;NM_001330751;NM_013261
Chr.4: 23792021 - 23890047
ENST00000506055
Nonsense mediated decay
Chr.4: 23795698 - 23890032
ENST00000507380
Protein coding
CCDS87212
NM_001354828
Chr.4: 23882679 - 23890035
ENST00000513205
Nonsense mediated decay
Chr.4: 23814333 - 23890035
ENST00000515534
Processed transcript
Chr.4: 23866120 - 23890029
ENST00000612355
Protein coding
Chr.4: 23824372 - 23890077
ENST00000617484
Protein coding
Chr.4: 23820610 - 23890077