Assay name
HS_CLN5_1840962 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for CLN5
Assay targets 16 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay targets 16 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Gene symbol
CLN5
Species
Homo sapiens
Main target
ENST00000636780
Exons numbers
2-3
Ensembl exons ids
ENSE00003724627;ENSE00000684230
Amplicon start
340
Amplicon length
138
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000377453
Protein coding
Chr.13: 76992084 - 77002506
ENST00000485938
Protein coding
Chr.13: 76992059 - 76997863
ENST00000616833
Protein coding
Chr.13: 76992091 - 77002345
ENST00000635905
Retained intron
Chr.13: 76992098 - 77010968
ENST00000635915
Nonsense mediated decay
Chr.13: 76992160 - 77002411
ENST00000635989
Processed transcript
Chr.13: 76992089 - 76996099
ENST00000636183
Protein coding
Chr.13: 76990660 - 77005117
ENST00000636520
Retained intron
Chr.13: 76994051 - 76999939
ENST00000636525
Protein coding
Chr.13: 76992096 - 77019143
ENST00000636681
Nonsense mediated decay
Chr.13: 76992385 - 77001331
ENST00000636705
Protein coding
Chr.13: 76992573 - 77002464
ENST00000636767
Protein coding
Chr.13: 76992098 - 77018366
ENST00000636780
Protein coding
NM_001366624
Chr.13: 76992044 - 77002477
ENST00000637397
Protein coding
Chr.13: 76992087 - 77017131
ENST00000637537
Protein coding
Chr.13: 76992078 - 76999976
ENST00000650992
Protein coding
CCDS9456
NM_006493
Chr.13: 76991952 - 77000969