Assay name
HS_TRIM5_1878109 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for TRIM5
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
TRIM5
Gene aliases
RNF88;TRIM5alpha
Species
Homo sapiens
Main target
ENST00000396847
Exons numbers
3-4
Ensembl exons ids
ENSE00003499028;ENSE00003496416
Amplicon start
736
Amplicon length
74
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000380027
Protein coding
CCDS31392
NM_033093
Chr.11: 5663563 - 5872358
ENST00000380034
Protein coding
CCDS31393
NM_033034
Chr.11: 5663557 - 5685063
ENST00000396847
Protein coding
CCDS31394
NM_033092
Chr.11: 5663617 - 5685042
ENST00000412903
Protein coding
Chr.11: 5678320 - 5938619
ENST00000433961
Nonsense mediated decay
Chr.11: 5663564 - 5680232
ENST00000438025
Protein coding
Chr.11: 5663831 - 5679807
ENST00000465634
Processed transcript
Chr.11: 5665880 - 5679833
ENST00000483835
Processed transcript
Chr.11: 5664058 - 5679857
ENST00000487241
Retained intron
Chr.11: 5677946 - 5679931
ENST00000492086
Processed transcript
Chr.11: 5665420 - 5679140