Assay name
MM_ATG16L1_2180371 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Atg16l1
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Atg16l1
Species
Mus musculus
Main target
ENSMUST00000151037
Exons numbers
5-6
Ensembl exons ids
ENSMUSE00001270056;ENSMUSE00001236139
Amplicon start
726
Amplicon length
93
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000027512
Protein coding
CCDS15136
NM_029846
Chr.1: 87756013 - 87792428
ENSMUST00000113186
Protein coding
CCDS56638
NM_001205392
Chr.1: 87756076 - 87792422
ENSMUST00000113190
Protein coding
CCDS56637
NM_001205391
Chr.1: 87756086 - 87792425
ENSMUST00000129431
Retained intron
Chr.1: 87766901 - 87775142
ENSMUST00000137638
Retained intron
Chr.1: 87756076 - 87786199
ENSMUST00000151037
Retained intron
Chr.1: 87756088 - 87792425