Assay name
HS_MSH2_1298684 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for MSH2
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
MSH2
Gene aliases
HNPCC;HNPCC1;MSH-2;COCA1
Species
Homo sapiens
Main target
ENST00000645506
Exons numbers
2-3
Ensembl exons ids
ENSE00002457696;ENSE00001645164
Amplicon start
387
Amplicon length
69
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000233146
Protein coding
CCDS1834
NM_000251
Chr.2: 47402969 - 47483228
ENST00000406134
Protein coding
Chr.2: 47403130 - 47513234
ENST00000454849
Protein coding
Chr.2: 47403067 - 47410346
ENST00000543555
Protein coding
CCDS58709
NM_001258281
Chr.2: 47403067 - 47483227
ENST00000644092
Nonsense mediated decay
Chr.2: 47403119 - 47663146
ENST00000645339
Nonsense mediated decay
Chr.2: 47403119 - 47661102
ENST00000645506
Protein coding
Chr.2: 47403119 - 47567156
ENST00000646415
Nonsense mediated decay
Chr.2: 47403119 - 47634309