Assay name​
HS_PTPRM_1818542 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for PTPRM
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
PTPRM
Gene aliases​
RPTPU;hR-PTPu;PTPRL1
Species​
Homo sapiens
Main target​
ENST00000577468
Exons numbers​
4-5
Ensembl exons ids​
ENSE00003532602;ENSE00003527386
Amplicon start​
421
Amplicon length​
123
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000332175
Protein coding
CCDS11840
NM_002845
Chr.18: 7566782 - 8406861
ENST00000400053
Protein coding
Chr.18: 7754973 - 8406856
ENST00000400060
Protein coding
Chr.18: 7774140 - 8406858
ENST00000577468
Protein coding
Chr.18: 8113571 - 8296455
ENST00000577827
Retained intron
Chr.18: 8121852 - 8406666
ENST00000578093
Processed transcript
Chr.18: 8244057 - 8251821
ENST00000580170
Protein coding
CCDS58613
NM_001105244
Chr.18: 7566782 - 8406668