Best coverage assay for PNKP
Best transcript assay for ENST00000322344
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000322344
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay name​
HS_PNKP_2475142 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for PNKP
Best transcript assay for ENST00000322344
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000322344
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
PNKP
Gene aliases​
PNK
Species​
Homo sapiens
Main target​
ENST00000322344
Exons numbers​
5-7
Ensembl exons ids​
ENSE00003528547, ENSE00003587695, ENSE00003578285
Amplicon start​
693
Amplicon length​
77
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000322344
Protein coding
CCDS12783
NM_007254
Chr.19: 49861204 - 49867576
ENST00000593946
Nonsense mediated decay
Chr.19: 49861204 - 49867234
ENST00000596014
Protein coding
CCDS12783
Chr.19: 49861231 - 49867286
ENST00000599543
Protein coding
Chr.19: 49863966 - 49867909
ENST00000600573
Protein coding
Chr.19: 49861240 - 49867576
ENST00000600910
Protein coding
Chr.19: 49861204 - 49867555
ENST00000636214
Nonsense mediated decay
Chr.19: 49863731 - 49867880