Assay name​
HS_MSH5_1290343 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for MSH5
Best transcript assay for ENST00000414514
Assay targets 7 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Best transcript assay for ENST00000414514
Assay targets 7 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Gene symbol​
MSH5
Species​
Homo sapiens
Main target​
ENST00000414514
Exons numbers​
6-7
Ensembl exons ids​
ENSE00003691433;ENSE00003610977
Amplicon start​
656
Amplicon length​
74
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000414514
Protein coding
NM_172166;NM_002441
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31748922 - 31753433
ENST00000426512
Protein coding
NM_172165
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31748922 - 31753433
ENST00000444225
Protein coding
NM_025259
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31748922 - 31753433
ENST00000448169
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31747349 - 31753433
ENST00000492052
Nonsense mediated decay
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31750674 - 31753433
ENST00000548003
Protein coding
Chr.CHR_HSCHR6_MHC_SSTO_CTG1: 31750202 - 31755602