Assay name​
HS_CHAT_1354249 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for CHAT
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 9 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
CHAT
Species​
Homo sapiens
Main target​
ENST00000337653
Exons numbers​
14-15
Ensembl exons ids​
ENSE00003500489;ENSE00003495448
Amplicon start​
2081
Amplicon length​
74
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000337653
Protein coding
CCDS7232
NM_020549
Chr.10: 49614037 - 49665104
ENST00000339797
Protein coding
CCDS7233
NM_020984
Chr.10: 49609095 - 49665104
ENST00000351556
Protein coding
CCDS7233
NM_020985;NM_001142934;NM_001142929
Chr.10: 49613108 - 49665104
ENST00000395559
Protein coding
CCDS7233
NM_020986
Chr.10: 49613108 - 49665104
ENST00000395562
Protein coding
CCDS44389
NM_001142933
Chr.10: 49614037 - 49665104
ENST00000466590
Nonsense mediated decay
Chr.10: 49614037 - 49665104
ENST00000638282
Nonsense mediated decay
Chr.10: 49637529 - 49665076
ENST00000638683
Retained intron
Chr.10: 49651736 - 49665078
ENST00000640822
Protein coding
Chr.10: 49637400 - 49665067