Assay name​
HS_CACNA1A_1359016 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for CACNA1A
Assay targets 24 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 24 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
CACNA1A
Gene aliases​
Cav2.1;EA2;APCA;HPCA;FHM;CACNL1A4;SCA6;MHP1;MHP
Species​
Homo sapiens
Main target​
ENST00000360228
Exons numbers​
35-36
Ensembl exons ids​
ENSE00001247101;ENSE00001247106
Amplicon start​
5561
Amplicon length​
122
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000360228
Protein coding
CCDS45998
NM_001127222
Chr.19: 13206442 - 13506459
ENST00000573710
Protein coding
Chr.19: 13207302 - 13506255
ENST00000573891
Nonsense mediated decay
Chr.19: 13230133 - 13255098
ENST00000574822
Processed transcript
Chr.19: 13229062 - 13253080
ENST00000585802
Protein coding
Chr.19: 13207266 - 13253011
ENST00000587525
Protein coding
Chr.19: 13206494 - 13257400
ENST00000614285
Protein coding
Chr.19: 13206442 - 13506224
ENST00000635727
Protein coding
Chr.19: 13207301 - 13506224
ENST00000635742
Retained intron
Chr.19: 13229689 - 13262811
ENST00000635895
Protein coding
Chr.19: 13206446 - 13506495
ENST00000636012
Protein coding
Chr.19: 13207301 - 13506224
ENST00000636389
Protein coding
Chr.19: 13206740 - 13506272
ENST00000636549
Protein coding
CCDS82302
NM_001174080
Chr.19: 13208046 - 13506224
ENST00000637276
Protein coding
Chr.19: 13207661 - 13506224
ENST00000637432
Protein coding
CCDS82301
NM_000068
Chr.19: 13207274 - 13506460
ENST00000637736
Protein coding
Chr.19: 13206591 - 13506459
ENST00000637769
Protein coding
Chr.19: 13206445 - 13506480
ENST00000637777
Nonsense mediated decay
Chr.19: 13228790 - 13245215
ENST00000637809
Retained intron
Chr.19: 13230132 - 13245518
ENST00000637819
Protein coding
Chr.19: 13212707 - 13255247
ENST00000637832
Retained intron
Chr.19: 13228617 - 13235674
ENST00000637927
Protein coding
Chr.19: 13208019 - 13506255
ENST00000638009
Protein coding
CCDS45999
NM_001127221
Chr.19: 13206446 - 13506503
ENST00000638029
Protein coding
CCDS82300
NM_023035
Chr.19: 13207274 - 13506460