Assay name​
HS_HIF1A_2474884 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for HIF1A
Best transcript assay for ENST00000323441
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000323441
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
HIF1A
Gene aliases​
MOP1;HIF-1alpha;PASD8;HIF1;bHLHe78
Species​
Homo sapiens
Main target​
ENST00000323441
Exons numbers​
4-5
Ensembl exons ids​
ENSE00003533403;ENSE00003673401
Amplicon start​
453
Amplicon length​
107
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000323441
Protein coding
CCDS9754
NM_181054
Chr.14: 61695777 - 61748258
ENST00000337138
Protein coding
CCDS9753
NM_001530
Chr.14: 61695513 - 61748258
ENST00000394997
Protein coding
Chr.14: 61695540 - 61748258
ENST00000539097
Protein coding
CCDS58324
NM_001243084
Chr.14: 61697622 - 61748259
ENST00000557206
Processed transcript
Chr.14: 61698895 - 61727632
ENST00000557538
Protein coding
Chr.14: 61697622 - 61747771