Assay name​
MM_CCR6_2123774 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for Ccr6
Assay targets 7 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 7 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
Ccr6
Species​
Mus musculus
Main target​
ENSMUST00000164411
Exons numbers​
2
Ensembl exons ids​
ENSMUSE00000273798
Amplicon start​
708
Amplicon length​
105
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000097418
Protein coding
CCDS28381
NM_009835
Chr.17: 8242526 - 8257127
ENSMUST00000164411
Protein coding
CCDS28381
NM_001190333
Chr.17: 8236212 - 8257141
ENSMUST00000166348
Protein coding
CCDS28381
NM_001190336
Chr.17: 8243811 - 8257091
ENSMUST00000167956
Protein coding
CCDS28381
NM_001190337
Chr.17: 8243814 - 8257087
ENSMUST00000177568
Protein coding
CCDS28381
NM_001190335
Chr.17: 8243811 - 8257091
ENSMUST00000180103
Protein coding
CCDS28381
NM_001190334
Chr.17: 8243811 - 8257091
ENSMUST00000231545
Protein coding
CCDS28381
NM_001190338
Chr.17: 8245065 - 8257120