Assay name​
MM_SCN9A_2176234 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for Scn9a
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
Scn9a
Species​
Mus musculus
Main target​
ENSMUST00000151234
Exons numbers​
1-2
Ensembl exons ids​
ENSMUSE00000834137;ENSMUSE00000729792
Amplicon start​
26
Amplicon length​
132
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000100063
Protein coding
Chr.2: 66480080 - 66634952
ENSMUST00000100064
Protein coding
CCDS71063
NM_001290674
Chr.2: 66480080 - 66634952
ENSMUST00000112354
Protein coding
Chr.2: 66483117 - 66634653
ENSMUST00000151234
Retained intron
Chr.2: 66540015 - 66543175
ENSMUST00000164384
Protein coding
Chr.2: 66482091 - 66634653
ENSMUST00000169900
Protein coding
NM_001290675
Chr.2: 66482091 - 66634653