Assay name​
HS_DEPDC5_1283004 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for DEPDC5
Assay targets 33 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 33 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
DEPDC5
Gene aliases​
KIAA0645;DEP.5
Species​
Homo sapiens
Main target​
ENST00000643948
Exons numbers​
5-6
Ensembl exons ids​
ENSE00003482216;ENSE00003828104
Amplicon start​
317
Amplicon length​
119
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000382111
Protein coding
Chr.22: 31754862 - 31906898
ENST00000382112
Protein coding
CCDS74849
Chr.22: 31753971 - 31906989
ENST00000400242
Protein coding
CCDS43007
NM_001007188
Chr.22: 31754019 - 31815991
ENST00000400246
Protein coding
CCDS74849
Chr.22: 31754059 - 31906943
ENST00000400248
Protein coding
CCDS43006
NM_014662
Chr.22: 31753974 - 31907014
ENST00000400249
Protein coding
CCDS87017
Chr.22: 31754133 - 31907009
ENST00000437411
Protein coding
Chr.22: 31753944 - 31784788
ENST00000456178
Protein coding
Chr.22: 31753979 - 31778137
ENST00000535622
Protein coding
CCDS56229
NM_001242897
Chr.22: 31753867 - 31906992
ENST00000642684
Nonsense mediated decay
NM_001364320
Chr.22: 31754015 - 31906975
ENST00000642696
Protein coding
CCDS43006
Chr.22: 31754001 - 31908033
ENST00000642771
Nonsense mediated decay
Chr.22: 31753975 - 31906976
ENST00000642974
Protein coding
Chr.22: 31753898 - 31837324
ENST00000643395
Nonsense mediated decay
Chr.22: 31754109 - 31906768
ENST00000643751
Nonsense mediated decay
Chr.22: 31753982 - 31906997
ENST00000643948
Retained intron
Chr.22: 31753955 - 31769772
ENST00000644331
Protein coding
CCDS87017
NM_001363852
Chr.22: 31753912 - 31906989
ENST00000645015
Protein coding
Chr.22: 31754028 - 31784504
ENST00000645407
Protein coding
Chr.22: 31754915 - 31906730
ENST00000645494
Nonsense mediated decay
Chr.22: 31754059 - 31906989
ENST00000645560
Protein coding
CCDS87018
NM_001363854
Chr.22: 31753932 - 31907001
ENST00000645564
Protein coding
Chr.22: 31754068 - 31837279
ENST00000645693
Protein coding
Chr.22: 31753898 - 31837279
ENST00000645711
Protein coding
CCDS46692
NM_001136029
Chr.22: 31753900 - 31907005
ENST00000645755
Nonsense mediated decay
Chr.22: 31753955 - 31906989
ENST00000645785
Retained intron
Chr.22: 31760644 - 31792768
ENST00000645967
Nonsense mediated decay
Chr.22: 31754862 - 31819040
ENST00000646465
Protein coding
Chr.22: 31754068 - 31906992
ENST00000646515
Nonsense mediated decay
Chr.22: 31753977 - 31906994
ENST00000646755
Protein coding
CCDS43007
Chr.22: 31753964 - 31815973
ENST00000646969
Protein coding
CCDS87018
NM_001364319
Chr.22: 31753995 - 31906975
ENST00000646998
Nonsense mediated decay
Chr.22: 31754043 - 31906980
ENST00000651528
Protein coding
CCDS74849
NM_001364318;NM_001242896
Chr.22: 31754019 - 31907015