Assay name​
HS_VCAN_2475340 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for VCAN
Best transcript assay for ENST00000343200
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000343200
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
VCAN
Gene aliases​
PG-M;CSPG2
Species​
Homo sapiens
Main target​
ENST00000343200
Exons numbers​
5-6
Ensembl exons ids​
ENSE00002264573;ENSE00002285743
Amplicon start​
1061
Amplicon length​
66
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000265077
Protein coding
CCDS4060
NM_004385
Chr.5: 83471744 - 83582302
ENST00000342785
Protein coding
CCDS54875
NM_001164098
Chr.5: 83471674 - 83582303
ENST00000343200
Protein coding
CCDS54876
NM_001164097
Chr.5: 83471674 - 83582303
ENST00000502527
Protein coding
CCDS47242
NM_001126336
Chr.5: 83471925 - 83580448
ENST00000512590
Protein coding
Chr.5: 83471764 - 83581162
ENST00000513960
Protein coding
Chr.5: 83471777 - 83539684
ENST00000513984
Protein coding
Chr.5: 83471791 - 83512940