Assay name​
MM_HMGB1_2199653 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for Hmgb1
Assay targets 9 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 9 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
Hmgb1
Species​
Mus musculus
Main target​
ENSMUST00000202133
Exons numbers​
3-4
Ensembl exons ids​
ENSMUSE00001218962;ENSMUSE00001360238
Amplicon start​
209
Amplicon length​
99
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000085546
Protein coding
CCDS19883
NM_010439
Chr.5: 149046702 - 149053040
ENSMUST00000093196
Protein coding
CCDS19883
NM_001313894
Chr.5: 149048645 - 149051616
ENSMUST00000110505
Protein coding
CCDS19883
Chr.5: 149048228 - 149051300
ENSMUST00000123645
Retained intron
Chr.5: 149050373 - 149052981
ENSMUST00000125605
Protein coding
Chr.5: 149050315 - 149053513
ENSMUST00000133667
Retained intron
Chr.5: 149050068 - 149053016
ENSMUST00000138553
Protein coding
Chr.5: 149049824 - 149052377
ENSMUST00000139443
Protein coding
Chr.5: 149049401 - 149053011
ENSMUST00000202133
Protein coding
Chr.5: 149048793 - 149184489