Assay name
HS_BCL11A_1625546 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for BCL11A
Assay targets 20 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay targets 20 transcripts
Assay is within same exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Gene symbol
BCL11A
Gene aliases
BCL11A-XL;BCL11A-L;BCL11A-S;CTIP1;HBFQTL5;ZNF856;SMARCM1;EVI9
Species
Homo sapiens
Main target
ENST00000642384
Exons numbers
3
Ensembl exons ids
ENSE00003690078
Amplicon start
2111
Amplicon length
70
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000335712
Protein coding
NM_001365609
Chr.2: 60457679 - 60553658
ENST00000356842
Protein coding
CCDS1861
NM_018014
Chr.2: 60451146 - 60553571
ENST00000358510
Protein coding
CCDS86845
Chr.2: 60452422 - 60553409
ENST00000359629
Protein coding
CCDS46295
NM_138559
Chr.2: 60451167 - 60553634
ENST00000409351
Protein coding
Chr.2: 60541783 - 60553500
ENST00000489183
Protein coding
Chr.2: 60544230 - 60546180
ENST00000489516
Protein coding
Chr.2: 60451781 - 60550925
ENST00000631857
Nonsense mediated decay
Chr.2: 60452500 - 60553507
ENST00000642180
Protein coding
Chr.2: 60532860 - 60546283
ENST00000642384
Protein coding
CCDS1862
NM_022893
Chr.2: 60457192 - 60555154
ENST00000643004
Protein coding
Chr.2: 60522081 - 60553461
ENST00000643222
Protein coding
Chr.2: 60452314 - 60550907
ENST00000643459
Protein coding
Chr.2: 60461904 - 60550907
ENST00000643716
Protein coding
Chr.2: 60541844 - 60553632
ENST00000644606
Retained intron
Chr.2: 60468740 - 60546394
ENST00000646249
Protein coding
Chr.2: 60450520 - 60554467
ENST00000647038
Processed transcript
Chr.2: 60545918 - 60549913
ENST00000647469
Protein coding
Chr.2: 60541841 - 60546259
ENST00000647472
Nonsense mediated decay
Chr.2: 60451890 - 60546201