Assay name
HS_CSNK2A1_1635595 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for CSNK2A1
Assay targets 32 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Assay targets 32 transcripts
Assay spans exon
IMPORTANT: May detect gDNA
Pre-designed assay for dPCR and qPCR.
Gene symbol
CSNK2A1
Gene aliases
Cka1;Cka2
Species
Homo sapiens
Main target
ENST00000645091
Exons numbers
3-4
Ensembl exons ids
ENSE00003598248;ENSE00003493190
Amplicon start
278
Amplicon length
149
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000217244
Protein coding
CCDS13003
NM_177559
Chr.20: 472498 - 543790
ENST00000349736
Protein coding
CCDS13004
NM_177560
Chr.20: 481110 - 543792
ENST00000400217
Protein coding
CCDS13003
Chr.20: 483765 - 543730
ENST00000400227
Protein coding
Chr.20: 478465 - 543696
ENST00000460062
Protein coding
Chr.20: 492339 - 543770
ENST00000609525
Protein coding
Chr.20: 495797 - 543704
ENST00000609606
Retained intron
Chr.20: 498358 - 543790
ENST00000642689
Protein coding
Chr.20: 482711 - 543732
ENST00000643600
Protein coding
Chr.20: 489503 - 543718
ENST00000643660
Protein coding
CCDS13003
NM_001362771;NM_001362770
Chr.20: 472508 - 543732
ENST00000643680
Protein coding
Chr.20: 492254 - 543750
ENST00000643700
Retained intron
Chr.20: 481147 - 543712
ENST00000643968
Nonsense mediated decay
Chr.20: 494131 - 543704
ENST00000644003
Protein coding
CCDS13004
Chr.20: 482887 - 543735
ENST00000644170
Retained intron
Chr.20: 481147 - 543729
ENST00000644710
Protein coding
Chr.20: 482748 - 543735
ENST00000644885
Protein coding
Chr.20: 482724 - 543712
ENST00000645091
Protein coding
Chr.20: 497747 - 543727
ENST00000645234
Protein coding
Chr.20: 482715 - 543712
ENST00000645249
Nonsense mediated decay
Chr.20: 482922 - 543732
ENST00000645260
Protein coding
Chr.20: 481623 - 543727
ENST00000645623
Protein coding
CCDS13003
Chr.20: 473261 - 543738
ENST00000645840
Nonsense mediated decay
Chr.20: 481155 - 543790
ENST00000645910
Nonsense mediated decay
Chr.20: 481150 - 543759
ENST00000646305
Protein coding
CCDS13003
Chr.20: 481192 - 543712
ENST00000646443
Retained intron
Chr.20: 498455 - 505235
ENST00000646477
Protein coding
CCDS13004
Chr.20: 482724 - 543732
ENST00000646561
Protein coding
CCDS13003
NM_001895
Chr.20: 472498 - 543835
ENST00000646814
Protein coding
CCDS13003
Chr.20: 482722 - 543712
ENST00000647026
Protein coding
Chr.20: 483390 - 543732
ENST00000647155
Retained intron
Chr.20: 482782 - 543727
ENST00000647348
Protein coding
CCDS13003
Chr.20: 483791 - 543787