Assay name​
HS_CAPN3_1706191 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for CAPN3
Assay targets 17 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 17 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
CAPN3
Gene aliases​
CANP3;p94;nCL-1;LGMD2;LGMD2A
Species​
Homo sapiens
Main target​
ENST00000397200
Exons numbers​
7-9
Ensembl exons ids​
ENSE00003515072;ENSE00003507856;ENSE00003606999
Amplicon start​
671
Amplicon length​
116
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000318023
Protein coding
Chr.15: 42359500 - 42412317
ENST00000337571
Protein coding
CCDS10086
NM_173089
Chr.15: 42404779 - 42412315
ENST00000349748
Protein coding
CCDS10085
NM_173087
Chr.15: 42359585 - 42412317
ENST00000356316
Protein coding
CCDS10086
Chr.15: 42404779 - 42412317
ENST00000357568
Protein coding
CCDS32207
NM_024344
Chr.15: 42359585 - 42411773
ENST00000397163
Protein coding
CCDS45245
NM_000070
Chr.15: 42359501 - 42412317
ENST00000397200
Protein coding
CCDS45246
NM_173088
Chr.15: 42402390 - 42412317
ENST00000397204
Protein coding
CCDS10086
NM_173090
Chr.15: 42404831 - 42412315
ENST00000466222
Retained intron
Chr.15: 42408466 - 42412318
ENST00000561817
Protein coding
Chr.15: 42404798 - 42412317
ENST00000562199
Processed transcript
Chr.15: 42409787 - 42411001
ENST00000564503
Protein coding
Chr.15: 42408314 - 42411857
ENST00000565274
Nonsense mediated decay
Chr.15: 42405932 - 42411863
ENST00000565559
Protein coding
Chr.15: 42404867 - 42410911
ENST00000569136
Protein coding
CCDS10086
Chr.15: 42404780 - 42411942
ENST00000569827
Protein coding
Chr.15: 42402418 - 42411341
ENST00000638141
Processed transcript
Chr.15: 42374208 - 42411926