Assay name
HS_SSH2_1732209 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SSH2
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
SSH2
Gene aliases
KIAA1725
Species
Homo sapiens
Main target
ENST00000540801
Exons numbers
4-5
Ensembl exons ids
ENSE00003542573;ENSE00003571364
Amplicon start
488
Amplicon length
63
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000269033
Protein coding
CCDS11253
NM_033389
Chr.17: 29625938 - 29930152
ENST00000324677
Protein coding
NM_001282130;NM_001282131
Chr.17: 29673840 - 29761390
ENST00000394848
Retained intron
Chr.17: 29647694 - 29930000
ENST00000540801
Protein coding
CCDS74024
NM_001282129
Chr.17: 29625938 - 29930228
ENST00000577483
Retained intron
Chr.17: 29675830 - 29930107
ENST00000579040
Nonsense mediated decay
Chr.17: 29673901 - 29930173
ENST00000592397
Protein coding
Chr.17: 29677719 - 29839142
ENST00000649863
Protein coding
Chr.17: 29630800 - 29761417