Assay name​
HS_CTSL_1877533 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for CTSL
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
CTSL
Gene aliases​
FLJ31037;CTSL1
Species​
Homo sapiens
Main target​
ENST00000340342
Exons numbers​
1-2
Ensembl exons ids​
ENSE00001468719;ENSE00003520790
Amplicon start​
116
Amplicon length​
110
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000340342
Protein coding
CCDS6675
NM_145918;NM_001257973;NM_001257972
Chr.9: 87726109 - 87731386
ENST00000342020
Protein coding
Chr.9: 87726140 - 87728997
ENST00000343150
Protein coding
CCDS6675
NM_001257971;NM_001912
Chr.9: 87726119 - 87731469
ENST00000482054
Processed transcript
Chr.9: 87726140 - 87729680
ENST00000495822
Processed transcript
Chr.9: 87726134 - 87731393