Assay name
HS_ATG3_1374807 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for ATG3
Best transcript assay for ENST00000283290
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000283290
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
ATG3
Gene aliases
PC3-96;FLJ22125;MGC15201;DKFZp564M1178;APG3L
Species
Homo sapiens
Main target
ENST00000283290
Exons numbers
7-9
Ensembl exons ids
ENSE00003673942;ENSE00003641797;ENSE00003625404
Amplicon start
893
Amplicon length
66
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000283290
Protein coding
CCDS2966
NM_022488
Chr.3: 112532509 - 112561963
ENST00000402314
Protein coding
CCDS63721
NM_001278712
Chr.3: 112532510 - 112561916
ENST00000495756
Processed transcript
Chr.3: 112536210 - 112561924
ENST00000496423
Nonsense mediated decay
Chr.3: 112537735 - 112561652