Assay name
MM_ATXN1_2014595 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for Atxn1
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
Atxn1
Species
Mus musculus
Main target
ENSMUST00000222943
Exons numbers
2-3
Ensembl exons ids
ENSMUSE00000616011;ENSMUSE00001418827
Amplicon start
272
Amplicon length
76
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENSMUST00000091628
Protein coding
CCDS26483
NM_001199304;NM_009124
Chr.13: 45549755 - 45964976
ENSMUST00000167708
Protein coding
CCDS26483
Chr.13: 45556429 - 45964957
ENSMUST00000180110
Protein coding
CCDS56877
NM_001199305
Chr.13: 45556448 - 45964977
ENSMUST00000221082
Retained intron
Chr.13: 45792329 - 45965008
ENSMUST00000222610
Processed transcript
Chr.13: 45795543 - 45872288
ENSMUST00000222943
Processed transcript
Chr.13: 45795509 - 45964976