Fungal detection assay targeting the 28S ribosomal RNA gene
dPCR wet-lab validated
Product name
Sarocladium strictum
GeneGlobe Cat.No. (Assay ID)
DMA00476
Target region
28S ribosomal RNA gene
Target (NCBI taxonomy ID)
Sarocladium strictum (5046)
Acremonium strictum
Sarocladium strictum (W. Gams) Summerbell 2011
Template accession
GU219468.1
Taxonomy
Plants and Fungi
Secondary targets/specificity
Eurotiomycetes DC474 (1585412)
Aspergillus ustus (40382)
Sterigmatocystis ustus
Aspergillus nidulans (162425)
Aspergillus nidulellus
Emericella nidulans
Sterigmatocystis nidulans
Aspergillus terreus (33178)
Aspergillus terrestris
Aspergillus heterothallicus (41742)
Emericella heterothallica
Aspergillus silvaticus (176179)
Aspergillus sylvaticus
Aspergillus elongatus (41748)
Aspergillus sydowii (75750)
Sterigmatocystis sydowii
Application field
Infectious Diseases
Wet-lab tested in singleplex
Yes, tested dye - ROX
Wet-lab tested in multiplex
No
Recommended restriction enzyme
EcoRI
Template present in Microbial DNA Positive Control
No
Region of Interest
GAGCGGAACGACCACGCCGTAAAACACCCAATTTTTTAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTCAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCCTCACGGTCCGAGTTGTAATTTGTAGAGGATGCTTTTGGCGAGGTGCTTTCCGAG