NGS panels tailored to your research

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NGS CUSTOM PANEL DESIGNERS

Custom NGS panels in just a few clicks: transform your genome exploration

Our easy-to-use custom builders support DNA-seq, RNA-seq or multimodal sequencing and allow you to target specific regions of interest and uncover more insights in your research

Select Analyte

DNA

RNA

DNA + RNA

Select Species

All

Human

Microbial

Products	QIAseq Targeted DNA Pro Custom Panel For unprecedented ease-of-use and biological insights using targeted DNA sequencing GET STARTED	QIAseq Targeted cfDNA Ultra Custom Panel For ultrasensitive targeted next-generation sequencing of cfDNA on Illumina platforms GET STARTED	QIAseq Targeted DNA Custom Panels Digital DNA sequencing to confidently detect low-frequency variants GET STARTED	QIAseq xHYB Custom Human Panel A flexible customization, hybrid-capture-based solution to enable sample-to-insight, targeted sequencing of DNA by next-generation sequencing GET STARTED	QIAseq xHYB Custom Microbial Panel For targeted sequencing of custom-defined microbial targets using hybrid capture GET STARTED	QIAseq Targeted Methyl Custom Panels A liquid biopsy-compatible solution for targeting methylation status of DNA, from as low as 1 ng input DNA from cells and tissues, or 10 ng from FFPE samples and liquid biopsies GET STARTED
Application	DNA variant detection	cfDNA variant detection	DNA variant detection	DNA variant detection	Metagenomics, infectious disease research, environmental monitoring	Methylation status analysis
Analyte	DNA (including cfDNA, ctDNA)	cfDNA, ctDNA only	DNA (including cfDNA, ctDNA)	DNA (including cfDNA, ctDNA)	Bacterial and fungal DNA, viral DNA and RNA	DNA (including cfDNA, ctDNA)
Sample Input	10–200 ng	5–80 ng	10–200 ng	20–1000 ng	10–100 ng RNA/DNA or 1–5 µl viral nucleic acids extracted with carrier RNA	1–100 ng fresh DNA, 10–200 ng FFPE DNA, or 10–200 ng ccfDNA
Supported Species	Human	Human	Human	Human	Bacteria, fungi, viruses, other microbes	Human
Reference Genome	Human GRCh38	Human GRCh38	Human GRCh37/hg19	Human GRCh38	Varies	Human GRCh38/hg38 and GRCh37/hg19
Supported Platforms	Platform-agnostic solution	Illumina	Platform-agnostic solution	Platform-agnostic solution	Illumina	Illumina
Number of Samples	96	96	96	96	384	96, 384
Design Type	New design (own data), or boost a QIAGEN or your own predesigned panel	New design (own data), or boost a QIAGEN or your own predesigned panel	New design (own data), or boost a QIAGEN or your own predesigned panel	New design (own data), or boost a QIAGEN or your own predesigned panel	Custom selection of predesigned microbial targets; contact us for other targets	New design (own data), or boost a QIAGEN or your own predesigned panel
Other Features	UMI, UDI	UMI, UDI	UMI, UDI	dsDNA probes	UDI, dsDNA probes	UMI
Data Analysis Solution	Variant calling using GeneGlobe Data Analysis Portal; variant calling using CLC Genomics Workbench	CLC Genomics Workbench	GeneGlobe Data Analysis Portal, CLC Genomics Workbench	CLC Genomics Workbench	GeneGlobe Data Analysis Portal, CLC Genomics Workbench	GeneGlobe Data Analysis Portal, CLC Genomics Workbench
Technology	QIAseq enrichment technology (one target-specific primer and one universal primer)	QIAseq enrichment technology (one target-specific primer and one universal primer)	QIAseq enrichment technology (one target-specific primer and one universal primer)	Hybrid capture	Hybrid capture	QIAseq enrichment technology (one target-specific primer and one universal primer)

Products	QIAseq Targeted DNA Pro Custom Panel For unprecedented ease-of-use and biological insights using targeted DNA sequencing GET STARTED	QIAseq Targeted cfDNA Ultra Custom Panel For ultrasensitive targeted next-generation sequencing of cfDNA on Illumina platforms GET STARTED	QIAseq Targeted DNA Custom Panels Digital DNA sequencing to confidently detect low-frequency variants GET STARTED	QIAseq xHYB Custom Human Panel A flexible customization, hybrid-capture-based solution to enable sample-to-insight, targeted sequencing of DNA by next-generation sequencing GET STARTED	QIAseq Targeted Methyl Custom Panels A liquid biopsy-compatible solution for targeting methylation status of DNA, from as low as 1 ng input DNA from cells and tissues, or 10 ng from FFPE samples and liquid biopsies GET STARTED
Application	DNA variant detection	cfDNA variant detection	DNA variant detection	DNA variant detection	Methylation status analysis
Analyte	DNA (including cfDNA, ctDNA)	cfDNA, ctDNA only	DNA (including cfDNA, ctDNA)	DNA (including cfDNA, ctDNA)	DNA (including cfDNA, ctDNA)
Sample Input	10–200 ng	5–80 ng	10–200 ng	20–1000 ng	1–100 ng fresh DNA, 10–200 ng FFPE DNA, or 10–200 ng ccfDNA
Supported Species	Human	Human	Human	Human	Human
Reference Genome	Human GRCh38	Human GRCh38	Human GRCh37/hg19	Human GRCh38	Human GRCh38/hg38 and GRCh37/hg19
Supported Platforms	Platform-agnostic solution	Illumina	Platform-agnostic solution	Platform-agnostic solution	Illumina
Number of Samples	96	96	96	96	96, 384
Design Type	New design (own data), or boost a QIAGEN or your own predesigned panel	New design (own data), or boost a QIAGEN or your own predesigned panel	New design (own data), or boost a QIAGEN or your own predesigned panel	New design (own data), or boost a QIAGEN or your own predesigned panel	New design (own data), or boost a QIAGEN or your own predesigned panel
Other Features	UMI, UDI	UMI, UDI	UMI, UDI	dsDNA probes	UMI
Data Analysis Solution	Variant calling using GeneGlobe Data Analysis Portal; variant calling using CLC Genomics Workbench	CLC Genomics Workbench	GeneGlobe Data Analysis Portal, CLC Genomics Workbench	CLC Genomics Workbench	GeneGlobe Data Analysis Portal, CLC Genomics Workbench
Technology	QIAseq enrichment technology (one target-specific primer and one universal primer)	QIAseq enrichment technology (one target-specific primer and one universal primer)	QIAseq enrichment technology (one target-specific primer and one universal primer)	Hybrid capture	QIAseq enrichment technology (one target-specific primer and one universal primer)

Products	QIAseq xHYB Custom Microbial Panel For targeted sequencing of custom-defined microbial targets using hybrid capture GET STARTED
Application	Metagenomics, infectious disease research, environmental monitoring
Analyte	Bacterial and fungal DNA, viral DNA and RNA
Sample Input	10–100 ng RNA/DNA or 1–5 µl viral nucleic acids extracted with carrier RNA
Supported Species	Bacteria, fungi, viruses, other microbes
Reference Genome	Varies
Supported Platforms	Illumina
Number of Samples	384
Design Type	Custom selection of predesigned microbial targets; contact us for other targets
Other Features	UDI, dsDNA probes
Data Analysis Solution	GeneGlobe Data Analysis Portal, CLC Genomics Workbench
Technology	Hybrid capture

Select Species

Human

Mouse

Rat

Microbial

Others

Products	QIAseq Targeted RNA Custom Panels For highly accurate gene expression quantification using UMIs GET STARTED	QIAseq UPX 3' Targeted RNA Panels For ultraplex (UPX) gene expression using targeted 3' RNA-seq from cell lysates and up to 10ng of RNA GET STARTED	QIAseq FastSelect Custom RNA Removal Kit For rapid removal of unwanted RNAs during RNA-seq library preparation GET STARTED	QIAseq Fusion XP Custom Panels Comprehensive oncology profiling combining gene fusion detection, gene expression analysis and single nucleotide variant (SNV) calling in just one assay GET STARTED
Application	Quantitative gene expression profiling	3' RNAseq from low-input samples	Removal of unwanted RNA from RNA-seq libraries	Gene fusion, gene expression, exon skipping and RNA SNV/InDel analysis
Analyte	RNA	RNA	RNA	RNA
Sample Input	25 ng to 5 μg; Less than 25 ng with low-input protocol	Cell lysate and isolated RNA from 10 pg to 10 ng per sample	Flexibility to use RNA from FFPE samples or degraded RNA samples, or high-quality RNA	Difficult sample types such as FFPE, isolated total RNA (10 ng or even less)
Supported Species	Human, mouse, rat	Human, mouse	All	Human
Reference Genome	Human GRCh38, Mouse GRCm38, Rat RGCS6.0/rn6	Ensemble V87 human: GRCh38.p2; mouse: GRCm38.p5	N/A	Human GRCh38/hg38
Supported Platforms	Illumina and Thermo-Fisher NGS instruments	Illumina NGS instruments	QIAGEN, Illumina, NEB, KAPA and other stranded RNA-seq library kits	Illumina and Thermo-Fisher NGS instruments
Number of Samples	12, 96, 384	96, 4x96, 384	1536	96
Design Type	New design or extend a predesigned panel	Custom panel of 12 to 1000 genes	Specify up to 20,000 bases of RNAs for removal	New design (own data), Boost own or QIAGEN product
Other Features	UMI	UMI, UPX		UMI, UDI
Data Analysis Solution	Access to GeneGlobe Data Analysis Portal (including read alignment and data normalization, differential gene expression) at no additional costs	Includes cloud-based read alignment	Analyze RNA-seq data with ease using the GeneGlobe-integrated RNA-seq Analysis Portal – an intuitive, web-based data analysis solution created for biologists and included with this QIAseq Kit	GeneGlobe Data Analysis Portal, CLC Genomics Workbench
Technology	2-primer amplicon-based (single amplicon per gene)	Pooled cDNA uses 2 primer amplicon consisting of a universal primer and transcript specific primer		QIAseq enrichment technology (one target-specific primer and one universal primer)

Products	QIAseq Targeted RNA Custom Panels For highly accurate gene expression quantification using UMIs GET STARTED	QIAseq UPX 3' Targeted RNA Panels For ultraplex (UPX) gene expression using targeted 3' RNA-seq from cell lysates and up to 10ng of RNA GET STARTED	QIAseq FastSelect Custom RNA Removal Kit For rapid removal of unwanted RNAs during RNA-seq library preparation GET STARTED
Application	Quantitative gene expression profiling	3' RNAseq from low-input samples	Removal of unwanted RNA from RNA-seq libraries
Analyte	RNA	RNA	RNA
Sample Input	25 ng to 5 μg; Less than 25 ng with low-input protocol	Cell lysate and isolated RNA from 10 pg to 10 ng per sample	Flexibility to use RNA from FFPE samples or degraded RNA samples, or high-quality RNA
Supported Species	Human, mouse, rat	Human, mouse	All
Reference Genome	Human GRCh38, Mouse GRCm38, Rat RGCS6.0/rn6	Ensemble V87 human: GRCh38.p2; mouse: GRCm38.p5	N/A
Supported Platforms	Illumina and Thermo-Fisher NGS instruments	Illumina NGS instruments	QIAGEN, Illumina, NEB, KAPA and other stranded RNA-seq library kits
Number of Samples	12, 96, 384	96, 4x96, 384	1536
Design Type	New design or extend a predesigned panel	Custom panel of 12 to 1000 genes	Specify up to 20,000 bases of RNAs for removal
Other Features	UMI	UMI, UPX
Data Analysis Solution	Access to GeneGlobe Data Analysis Portal (including read alignment and data normalization, differential gene expression) at no additional costs	Includes cloud-based read alignment	Analyze RNA-seq data with ease using the GeneGlobe-integrated RNA-seq Analysis Portal – an intuitive, web-based data analysis solution created for biologists and included with this QIAseq Kit
Technology	2-primer amplicon-based (single amplicon per gene)	Pooled cDNA uses 2 primer amplicon consisting of a universal primer and transcript specific primer

Products ??????	QIAseq Targeted RNA Custom Panels For highly accurate gene expression quantification using UMIs GET STARTED	QIAseq FastSelect Custom RNA Removal Kit For rapid removal of unwanted RNAs during RNA-seq library preparation GET STARTED
Application	Quantitative gene expression profiling	Removal of unwanted RNA from RNA-seq libraries
Analyte	RNA	RNA
Sample Input	25 ng to 5 μg; Less than 25 ng with low-input protocol	Flexibility to use RNA from FFPE samples or degraded RNA samples, or high-quality RNA
Supported Species	Human, mouse, rat	All
Reference Genome	Human GRCh38, Mouse GRCm38, Rat RGCS6.0/rn6	N/A
Supported Platforms	Illumina and Thermo-Fisher NGS instruments	QIAGEN, Illumina, NEB, KAPA and other stranded RNA-seq library kits
Number of Samples	12, 96, 384	1536
Design Type	New design or extend a predesigned panel	Specify up to 20,000 bases of RNAs for removal
Other Features	UMI
Data Analysis Solution	Access to GeneGlobe Data Analysis Portal (including read alignment and data normalization, differential gene expression) at no additional costs	Analyze RNA-seq data with ease using the GeneGlobe-integrated RNA-seq Analysis Portal – an intuitive, web-based data analysis solution created for biologists and included with this QIAseq Kit
Technology	2-primer amplicon-based (single amplicon per gene)

Products	QIAseq FastSelect Custom RNA Removal Kit For rapid removal of unwanted RNAs during RNA-seq library preparation GET STARTED	QIAseq xHYB Custom Microbial Panel For targeted sequencing of custom-defined microbial targets using hybrid capture GET STARTED
Application	Removal of unwanted RNA from RNA-seq libraries	Metagenomics, infectious disease research, environmental monitoring
Analyte	RNA	Bacterial and fungal DNA, viral DNA and RNA
Sample Input	Flexibility to use RNA from FFPE samples or degraded RNA samples, or high-quality RNA	10–100 ng RNA/DNA or 1–5 µl viral nucleic acids extracted with carrier RNA
Supported Species	All	Bacteria, fungi, viruses, other microbes
Reference Genome	N/A	Varies
Supported Platforms	QIAGEN, Illumina, NEB, KAPA and other stranded RNA-seq library kits	Illumina
Number of Samples	1536	384
Design Type	Specify up to 20,000 bases of RNAs for removal	Custom selection of predesigned microbial targets; contact us for other targets
Other Features		UDI, dsDNA probes
Data Analysis Solution	Analyze RNA-seq data with ease using the GeneGlobe-integrated RNA-seq Analysis Portal – an intuitive, web-based data analysis solution created for biologists and included with this QIAseq Kit	GeneGlobe Data Analysis Portal, CLC Genomics Workbench
Technology		Hybrid capture

Products	QIAseq FastSelect Custom RNA Removal Kit For rapid removal of unwanted RNAs during RNA-seq library preparation GET STARTED
Application	Removal of unwanted RNA from RNA-seq libraries
Analyte	RNA
Sample Input	Flexibility to use RNA from FFPE samples or degraded RNA samples, or high-quality RNA
Supported Species	All
Reference Genome	N/A
Supported Platforms	QIAGEN, Illumina, NEB, KAPA and other stranded RNA-seq library kits
Number of Samples	1536
Design Type	Specify up to 20,000 bases of RNAs for removal
Other Features
Data Analysis Solution	Analyze RNA-seq data with ease using the GeneGlobe-integrated RNA-seq Analysis Portal – an intuitive, web-based data analysis solution created for biologists and included with this QIAseq Kit
Technology

Products	QIAseq Multimodal HT Custom Panels A single day sample to sequencing workflow for simultaneous enrichment and profiling of DNA variants, RNA fusions and gene expression levels from one sample input, as low as 10 ng GET STARTED	QIAseq xHYB Custom Microbial Panel For targeted sequencing of custom-defined microbial targets using hybrid capture GET STARTED
Application	DNA: SNVs, InDels (also available: TMB/MSI); RNA: gene fusion, exon skipping, gene expression, SNVs, InDels	Metagenomics, infectious disease research, environmental monitoring
Analyte	DNA, RNA, DNA & RNA	Bacterial and fungal DNA, viral DNA and RNA
Sample Input	DNA: 10–40 ng for fresh samples or 40–250 ng for FFPE; RNA: 10–250 ng for fresh samples or 100–250 ng for FFPE	10–100 ng RNA/DNA or 1–5 µl viral nucleic acids extracted with carrier RNA
Supported Species	Human	Bacteria, fungi, viruses, other microbes
Reference Genome	DNA module: GRCh37/hg19; RNA module: GRCh38	Varies
Supported Platforms	Illumina, compatible with other platforms	Illumina
Number of Samples	96	384
Design Type	New design (own data), or boost a QIAGEN or your own predesigned panel	Custom selection of predesigned microbial targets; contact us for other targets
Other Features	UMI, UDI	UDI, dsDNA probes
Data Analysis Solution	GeneGlobe Data Analysis Portal, CLC Genomics Workbench	GeneGlobe Data Analysis Portal, CLC Genomics Workbench
Technology	QIAseq enrichment technology (one target-specific primer and one universal primer)	Hybrid capture

Access valuable RNA-seq insights in mere hours

Want to take the stress out of data analysis and fast-track your path to gene expression insights? With our new RNA-seq Analysis Portal, go from FASTQ files to pathway analysis insights in hours instead of days, integrating your data with qPCR and dPCR verification.

Easy. Fast. Online. Our portal supports the analyses for 18 different species using proven published algorithms. The RNA-seq Analysis Portal is compatible with QIAseq and other major RNA library kits. Perform your analyses anytime, anywhere.

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NGS panels tailored to your research

Products

QIAseq Targeted DNA Pro Custom Panel

QIAseq Targeted cfDNA Ultra Custom Panel

QIAseq Targeted DNA Custom Panels

QIAseq xHYB Custom Human Panel

QIAseq xHYB Custom Microbial Panel

QIAseq Targeted Methyl Custom Panels

Products

QIAseq Targeted RNA Custom Panels

QIAseq UPX 3' Targeted RNA Panels

QIAseq FastSelect Custom RNA Removal Kit

QIAseq Fusion XP Custom Panels

Access valuable RNA-seq insights in mere hours

Need help with your custom design?