Assay name​
HS_SLC6A4_1659882 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for SLC6A4
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 5 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol​
SLC6A4
Gene aliases​
5-HTT;SERT1;HTT;OCD1
Species​
Homo sapiens
Main target​
ENST00000578609
Exons numbers​
1-2
Ensembl exons ids​
ENSE00002694055;ENSE00002698313
Amplicon start​
463
Amplicon length​
97
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000261707
Protein coding
CCDS11256
Chr.17: 30194321 - 30235968
ENST00000401766
Protein coding
CCDS11256
Chr.17: 30194319 - 30236002
ENST00000578609
Retained intron
Chr.17: 30198476 - 30203682
ENST00000579221
Nonsense mediated decay
Chr.17: 30197921 - 30211369
ENST00000650711
Protein coding
CCDS11256
NM_001045
Chr.17: 30194319 - 30235697