LOC100911417 Gene Summary [Rat]

This gene encodes a subunit of mitochondrial ATP synthase. Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the inner membrane during oxidative phosphorylation. ATP synthase is composed of two linked multi-subunit complexes: the soluble catalytic core, F1, and the membrane-spanning component, Fo, comprising the proton channel. The catalytic portion of mitochondrial ATP synthase consists of 5 different subunits (alpha, beta, gamma, delta, and epsilon) assembled with a stoichiometry of 3 alpha, 3 beta, and a single representative of the other 3. The proton channel seems to have nine subunits (a, b, c, d, e, f, g, F6 and 8). This gene encodes the b subunit of the proton channel. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
LOC100911417
Official Name
ATP synthase subunit b, mitochondrial-like [Source:RGD Symbol;Acc:6493308]
Ensembl ID
ENSRNOG00000046299
Bio databases IDs NCBI: 171375 Ensembl: ENSRNOG00000046299
Aliases ATP synthase subunit b, mitochondrial-like
Synonyms ATP5F1, ATP synthase peripheral stalk-membrane subunit b, LOC100911417, PIG47
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Loc100911417 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • adenosine-tetraphosphatase
  • binding protein
  • F-type ATP synthase, membrane subunit b
  • protein binding
  • hydrogen-transporting ATP synthase activity, rotational mechanism
  • ATPase
  • transporter

Pathways

Biological processes and signaling networks where the Loc100911417 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • Huntington disease
  • Alzheimer disease
  • chromophobe renal cell carcinoma
  • chromophobe renal cancer
regulated by
  • beta-estradiol
  • LEP
  • TNF
  • poly rI:rC-RNA
  • TEAD1
  • metribolone
  • bisphenol A
  • TP53
  • arsenic trioxide
  • testosterone
role in cell
  • growth

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • myelin enriched fraction
  • pH resistant lipid raft fraction
  • detergent resistant lipid raft fraction
  • cristae-like membrane
  • cellular membrane
  • Mitochondria
  • myofilaments
  • mitochondrial inner membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Loc100911417 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • substantia nigra development
  • mitochondrial ATP synthesis coupled proton transport
  • ATP synthesis coupled proton transport

Cellular Component

Where in the cell the gene product is active
  • mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
  • nucleus
  • mitochondrial matrix
  • membrane
  • mitochondrion
  • mitochondrial inner membrane
  • mitochondrial proton-transporting ATP synthase complex

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • hydrogen ion transporting ATP synthase activity, rotational mechanism

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.