Foxi3 Gene Summary [Mouse]

Enables DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in several processes, including otic placode development; parathyroid gland development; and pharyngeal system development. Is active in nucleus. Is expressed in several structures, including alimentary system; branchial arch; exocrine system; integumental system; and sensory organ. Used to study Goldenhar syndrome. Orthologous to human FOXI3 (forkhead box I3). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Foxi3
Official Name
forkhead box I3 [Source:MGI Symbol;Acc:MGI:3511278]
Ensembl ID
ENSMUSG00000055874
Bio databases IDs NCBI: 232077 Ensembl: ENSMUSG00000055874
Aliases forkhead box I3
Synonyms CFM2, forkhead box I3, LOC669126, LOC730270, RGD1561816
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Foxi3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • transcription regulator
  • FH_FOX
  • Forkhead domain
  • FORKHEAD

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • Goldenhar syndrome
  • craniofacial microsomia type 1
  • craniofacial microsomia type 2
  • cranioschisis
regulated by
  • activin (family)
  • BMP4
role in cell
  • apoptosis

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Foxi3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • epidermal cell fate specification
  • hair follicle development
  • cell differentiation
  • odontogenesis of dentin-containing tooth
  • anatomical structure morphogenesis
  • pharyngeal system development
  • parathyroid gland development
  • regulation of transcription from RNA polymerase II promoter
  • thymus development

Cellular Component

Where in the cell the gene product is active
  • nucleus

Molecular Function

What the gene product does at the molecular level
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.