Assay name​
HS_CTNND1_1261865 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for CTNND1
Assay targets 31 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 31 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
CTNND1
Gene aliases​
KIAA0384;p120;p120cas;p120ctn;CTNND
Species​
Homo sapiens
Main target​
ENST00000361391
Exons numbers​
11-12
Ensembl exons ids​
ENSE00001189275;ENSE00001174123
Amplicon start​
2436
Amplicon length​
109
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000358694
Protein coding
CCDS44606
NM_001085461;NM_001085460
Chr.11: 57761797 - 57819178
ENST00000361332
Protein coding
CCDS44605
NM_001085459
Chr.11: 57761797 - 57819178
ENST00000361391
Protein coding
CCDS44607
NM_001331
Chr.11: 57761797 - 57819178
ENST00000361796
Protein coding
CCDS73290
NM_001206885
Chr.11: 57761797 - 57819178
ENST00000399050
Protein coding
CCDS44604
NM_001085458
Chr.11: 57761797 - 57819178
ENST00000415361
Protein coding
CCDS44608
NM_001085463
Chr.11: 57761797 - 57819178
ENST00000426142
Protein coding
CCDS44609
NM_001085467
Chr.11: 57761797 - 57819178
ENST00000428599
Protein coding
CCDS44606
NM_001085462
Chr.11: 57761797 - 57819178
ENST00000524630
Protein coding
CCDS44606
Chr.11: 57753243 - 57819546
ENST00000525902
Protein coding
Chr.11: 57761797 - 57819178
ENST00000526357
Protein coding
CCDS55765
NM_001206886
Chr.11: 57761797 - 57819178
ENST00000526772
Protein coding
Chr.11: 57761797 - 57819178
ENST00000526938
Protein coding
Chr.11: 57761818 - 57816717
ENST00000527467
Protein coding
Chr.11: 57761797 - 57819178
ENST00000528232
Protein coding
CCDS53632
NM_001085466
Chr.11: 57761797 - 57819178
ENST00000528621
Protein coding
CCDS55766
NM_001206888
Chr.11: 57761797 - 57819178
ENST00000529526
Protein coding
CCDS55766
NM_001206891
Chr.11: 57761797 - 57819178
ENST00000529873
Protein coding
CCDS55767
NM_001206887
Chr.11: 57761797 - 57819178
ENST00000529919
Protein coding
Chr.11: 57753290 - 57817940
ENST00000529986
Protein coding
CCDS44609
NM_001085468
Chr.11: 57761797 - 57819178
ENST00000530094
Protein coding
CCDS53633
NM_001085464
Chr.11: 57761797 - 57819178
ENST00000530720
Retained intron
Chr.11: 57806523 - 57808535
ENST00000530748
Protein coding
CCDS55764
NM_001206884
Chr.11: 57761797 - 57819178
ENST00000531014
Protein coding
Chr.11: 57761797 - 57819178
ENST00000532245
Protein coding
CCDS44609
NM_001085469
Chr.11: 57761797 - 57819178
ENST00000532463
Protein coding
CCDS44609
NM_001206890
Chr.11: 57761797 - 57819178
ENST00000532649
Protein coding
CCDS55766
NM_001206889
Chr.11: 57761797 - 57819178
ENST00000532787
Protein coding
CCDS53634
NM_001085465
Chr.11: 57761797 - 57819178
ENST00000532844
Protein coding
CCDS55763
NM_001206883
Chr.11: 57761797 - 57819178
ENST00000533667
Protein coding
Chr.11: 57761797 - 57819178
ENST00000534579
Protein coding
CCDS55766
Chr.11: 57761801 - 57819178