Assay name
HS_SMARCD1_1290983 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for SMARCD1
Best transcript assay for ENST00000547247
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Best transcript assay for ENST00000547247
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
SMARCD1
Gene aliases
BAF60A;Rsc6p;CRACD1
Species
Homo sapiens
Main target
ENST00000547247
Exons numbers
3-4
Ensembl exons ids
ENSE00003496255;ENSE00003571850
Amplicon start
426
Amplicon length
89
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000381513
Protein coding
CCDS8798
NM_139071
Chr.12: 50085200 - 50100642
ENST00000394963
Protein coding
CCDS8797
NM_003076
Chr.12: 50084972 - 50100712
ENST00000547247
Retained intron
Chr.12: 50085342 - 50089422
ENST00000547637
Retained intron
Chr.12: 50085353 - 50086917
ENST00000551497
Protein coding
Chr.12: 50085683 - 50086872
ENST00000551966
Protein coding
Chr.12: 50085325 - 50090326