Assay name
HS_ARNTL_1325846 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for ARNTL
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
ARNTL
Gene aliases
MOP3;JAP3;BMAL1;PASD3;bHLHe5;ARNTL1
Species
Homo sapiens
Main target
ENST00000480685
Exons numbers
3-4
Ensembl exons ids
ENSE00001259368;ENSE00003669143
Amplicon start
273
Amplicon length
78
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000389707
Protein coding
CCDS31430
NM_001351804;NM_001178;NM_001351819;NM_001030272;NM_001351810;NM_001351806;NM_001351815;NM_001351817
Chr.11: 13277798 - 13387266
ENST00000401424
Protein coding
CCDS76387
NM_001351812;NM_001351823;NM_001351808;NM_001351820;NM_001351821;NM_001351809;NM_001351816;NM_001297724;NM_001351822
Chr.11: 13277798 - 13387266
ENST00000403290
Protein coding
CCDS73259
NM_001351814;NM_001297719;NM_001351807;NM_001297722;NM_001351805;NM_001351824
Chr.11: 13277831 - 13387266
ENST00000403510
Protein coding
CCDS44543
NM_001351818;NM_001351813;NM_001030273
Chr.11: 13277842 - 13387263
ENST00000480685
Retained intron
Chr.11: 13277829 - 13356929
ENST00000482049
Protein coding
Chr.11: 13277885 - 13358558
ENST00000485918
Retained intron
Chr.11: 13349945 - 13354631
ENST00000527998
Protein coding
Chr.11: 13277639 - 13358440
ENST00000531665
Protein coding
Chr.11: 13309986 - 13357096
ENST00000534544
Protein coding
Chr.11: 13276652 - 13356777