Assay name​
HS_SYNE1_1326350 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for SYNE1
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 12 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
SYNE1
Gene aliases​
SYNE-1B;KIAA0796;8B;Nesprin-1;enaptin;MYNE1;CPG2;dJ45H2.2;SCAR8;ARCA1;Nesp1;C6orf98
Species​
Homo sapiens
Main target​
ENST00000474655
Exons numbers​
5-6
Ensembl exons ids​
ENSE00003595859;ENSE00003543433
Amplicon start​
454
Amplicon length​
123
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000341594
Protein coding
Chr.6: 152121684 - 152637399
ENST00000367248
Protein coding
Chr.6: 152433525 - 152636883
ENST00000367253
Protein coding
Chr.6: 152427604 - 152628331
ENST00000367255
Protein coding
CCDS5236
NM_182961
Chr.6: 152121687 - 152637362
ENST00000413186
Protein coding
Chr.6: 152435391 - 152628331
ENST00000423061
Protein coding
CCDS5235
NM_033071
Chr.6: 152121687 - 152636851
ENST00000461872
Retained intron
Chr.6: 152376065 - 152636683
ENST00000466159
Protein coding
Chr.6: 152462530 - 152628483
ENST00000474655
Nonsense mediated decay
Chr.6: 152453417 - 152472617
ENST00000481502
Processed transcript
Chr.6: 152463476 - 152471995
ENST00000495090
Protein coding
Chr.6: 152453416 - 152472630
ENST00000535896
Processed transcript
Chr.6: 152458757 - 152483237