Assay name
HS_PRPF40A_1328221 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for PRPF40A
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
PRPF40A
Gene aliases
FLJ20585;FBP11;HYPA;NY-REN-6;HIP10;FBP-11;FLAF1;Prp40;FNBP3
Species
Homo sapiens
Main target
ENST00000450303
Exons numbers
3-4
Ensembl exons ids
ENSE00001782900;ENSE00001864006
Amplicon start
250
Amplicon length
121
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000354363
Nonsense mediated decay
Chr.2: 152672548 - 152717461
ENST00000410080
Protein coding
NM_001365596;NM_001365600;NM_001365597;NM_001354432
Chr.2: 152651593 - 152717981
ENST00000448428
Protein coding
Chr.2: 152679056 - 152717457
ENST00000450303
Retained intron
Chr.2: 152694437 - 152717932
ENST00000489741
Retained intron
Chr.2: 152694063 - 152716130
ENST00000493468
Protein coding
Chr.2: 152676399 - 152717373
ENST00000545856
Protein coding
Chr.2: 152672565 - 152717407
ENST00000648940
Protein coding
CCDS46430
NM_001354431;NM_017892
Chr.2: 152656306 - 152717461