Assay name
HS_TDP1_1332204 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for TDP1
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
TDP1
Gene aliases
FLJ11090;SCAN1
Species
Homo sapiens
Main target
ENST00000555178
Exons numbers
4-5
Ensembl exons ids
ENSE00003463056;ENSE00003509861
Amplicon start
878
Amplicon length
108
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000335725
Protein coding
CCDS9888
NM_018319
Chr.14: 89955951 - 90044768
ENST00000393452
Protein coding
Chr.14: 89955902 - 90043341
ENST00000393454
Protein coding
CCDS9888
NM_001008744
Chr.14: 89955938 - 90043344
ENST00000545686
Nonsense mediated decay
Chr.14: 89956565 - 90043341
ENST00000553617
Protein coding
Chr.14: 89955941 - 89984587
ENST00000554180
Protein coding
Chr.14: 89955907 - 89980587
ENST00000554976
Nonsense mediated decay
Chr.14: 89954939 - 90043252
ENST00000555178
Nonsense mediated decay
Chr.14: 89956572 - 90043315
ENST00000555565
Processed transcript
Chr.14: 89955955 - 89980592
ENST00000555880
Protein coding
CCDS81836
NM_001330205
Chr.14: 89963105 - 90043309