Assay name
HS_VPS36_1344201 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for VPS36
Best transcript assay for ENST00000650274
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Best transcript assay for ENST00000650274
Assay targets 4 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
VPS36
Gene aliases
CGI-145;Eap45;C13orf9
Species
Homo sapiens
Main target
ENST00000650274
Exons numbers
7-9
Ensembl exons ids
ENSE00000923570;ENSE00003547681;ENSE00003652779
Amplicon start
575
Amplicon length
113
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000378060
Protein coding
CCDS9434
NM_001282168;NM_016075
Chr.13: 52412606 - 52450634
ENST00000492650
Processed transcript
Chr.13: 52425770 - 52429367
ENST00000611132
Protein coding
CCDS73577
NM_001282169
Chr.13: 52412602 - 52450244
ENST00000650274
Nonsense mediated decay
Chr.13: 52412602 - 52450622