Assay name
HS_KDM5B_1380186 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for KDM5B
Best transcript assay for ENST00000367265
Assay targets 17 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000367265
Assay targets 17 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
KDM5B
Gene aliases
RBBP2H1A;PLU-1;CT31;PPP1R98;JARID1B
Species
Homo sapiens
Main target
ENST00000367265
Exons numbers
22-23
Ensembl exons ids
ENSE00001297765;ENSE00001324008
Amplicon start
4573
Amplicon length
85
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000235790
Protein coding
Chr.1: 202729905 - 202807348
ENST00000367264
Protein coding
CCDS81417
NM_001314042
Chr.1: 202727435 - 202808481
ENST00000367265
Protein coding
CCDS30974
NM_006618
Chr.1: 202724495 - 202809470
ENST00000498276
Retained intron
Chr.1: 202728448 - 202746604
ENST00000647757
Processed transcript
Chr.1: 202727412 - 202808052
ENST00000648056
Protein coding
Chr.1: 202727448 - 202808487
ENST00000648338
Protein coding
Chr.1: 202724887 - 202808473
ENST00000648469
Protein coding
Chr.1: 202728291 - 202808470
ENST00000648473
Protein coding
Chr.1: 202727445 - 202808481
ENST00000649089
Nonsense mediated decay
Chr.1: 202728698 - 202750702
ENST00000649230
Retained intron
Chr.1: 202727494 - 202747565
ENST00000649400
Retained intron
Chr.1: 202727417 - 202745912
ENST00000649542
Processed transcript
Chr.1: 202727405 - 202808049
ENST00000649770
Protein coding
Chr.1: 202727675 - 202808421
ENST00000650417
Nonsense mediated decay
Chr.1: 202728481 - 202808481
ENST00000650506
Retained intron
Chr.1: 202727583 - 202743304
ENST00000650569
Protein coding
NM_001347591
Chr.1: 202727445 - 202808416