Assay name​
HS_STAG3_1396253 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for STAG3
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
STAG3
Species​
Homo sapiens
Main target​
ENST00000620100
Exons numbers​
30-31
Ensembl exons ids​
ENSE00003693953;ENSE00003550551
Amplicon start​
3724
Amplicon length​
99
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000317296
Protein coding
CCDS34703
NM_012447
Chr.7: 100177916 - 100214381
ENST00000394018
Protein coding
CCDS64730
NM_001282718
Chr.7: 100177743 - 100214380
ENST00000412190
Protein coding
Chr.7: 100205273 - 100214380
ENST00000426455
Protein coding
CCDS34703
NM_001282716
Chr.7: 100177563 - 100214380
ENST00000440830
Processed transcript
Chr.7: 100197474 - 100214383
ENST00000451963
Nonsense mediated decay
Chr.7: 100205357 - 100221488
ENST00000491498
Processed transcript
Chr.7: 100197442 - 100214381
ENST00000492674
Retained intron
Chr.7: 100211659 - 100214382
ENST00000496157
Retained intron
Chr.7: 100177935 - 100214387
ENST00000615138
Protein coding
CCDS75642
NM_001282717
Chr.7: 100177743 - 100214387
ENST00000620100
Protein coding
CCDS64730
Chr.7: 100177743 - 100214387