Assay name
HS_SMYD3_1426278 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for SMYD3
Best transcript assay for ENST00000630181
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000630181
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
SMYD3
Gene aliases
KMT3E;ZNFN3A1;ZMYND1
Species
Homo sapiens
Main target
ENST00000630181
Exons numbers
10-11
Ensembl exons ids
ENSE00003781340;ENSE00003677595
Amplicon start
988
Amplicon length
120
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000366516
Retained intron
Chr.1: 245749342 - 245930823
ENST00000366517
Processed transcript
Chr.1: 245749342 - 245956102
ENST00000470510
Processed transcript
Chr.1: 245749351 - 245929937
ENST00000490107
Protein coding
CCDS53486
NM_001167740
Chr.1: 245749347 - 246507279
ENST00000493441
Processed transcript
Chr.1: 245764041 - 245988562
ENST00000630181
Protein coding
CCDS31083
NM_022743
Chr.1: 245749342 - 246417409