Assay name
HS_ATG13_1429215 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for ATG13
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 11 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
ATG13
Gene aliases
KIAA0652
Species
Homo sapiens
Main target
ENST00000530500
Exons numbers
4-5
Ensembl exons ids
ENSE00003692251;ENSE00003500836
Amplicon start
542
Amplicon length
75
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000359513
Protein coding
CCDS44582
NM_001346321;NM_001346331;NM_001346326;NM_001142673;NM_001346340;NM_001346334;NM_001205120;NM_001346335
Chr.11: 46617596 - 46674818
ENST00000395549
Protein coding
Chr.11: 46617791 - 46657191
ENST00000524625
Protein coding
CCDS7921
NM_001346350;NM_001346348;NM_001346344;NM_001346346;NM_001346352;NM_001346342;NM_001346351;NM_014741;NM_001346355;NM_001346354
Chr.11: 46617577 - 46674520
ENST00000525850
Processed transcript
Chr.11: 46648727 - 46657618
ENST00000526508
Protein coding
CCDS44582
NM_001346319;NM_001346328;NM_001346333;NM_001346320;NM_001346322;NM_001346323;NM_001346325;NM_001346324;NM_001346338;NM_001346336;NM_001346332;NM_001346329;NM_001346330;NM_001346327;NM_001346337
Chr.11: 46617563 - 46674520
ENST00000528494
Protein coding
CCDS55760
NM_001346315;NM_001346314;NM_001346312;NM_001346313;NM_001346316;NM_001346311;NM_001346318;NM_001205119;NM_001346317
Chr.11: 46617600 - 46672726
ENST00000529655
Protein coding
CCDS7921
NM_001346353;NM_001346349;NM_001205121;NM_001346356
Chr.11: 46617541 - 46673041
ENST00000530500
Protein coding
CCDS55761
NM_001346357;NM_001346359;NM_001346360;NM_001346358;NM_001205122
Chr.11: 46617563 - 46672660
ENST00000533325
Protein coding
Chr.11: 46617549 - 46650216
ENST00000534610
Retained intron
Chr.11: 46617582 - 46660029