Assay name
HS_DDX41_1441009 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for DDX41
Best transcript assay for ENST00000330503
Assay targets 14 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Best transcript assay for ENST00000330503
Assay targets 14 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol
DDX41
Gene aliases
ABS;MGC8828
Species
Homo sapiens
Main target
ENST00000330503
Exons numbers
4-5
Ensembl exons ids
ENSE00003469987;ENSE00003662308
Amplicon start
355
Amplicon length
89
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000330503
Protein coding
CCDS4427
NM_001321830;NM_001321732;NM_016222
Chr.5: 177511577 - 177516961
ENST00000503078
Retained intron
Chr.5: 177511578 - 177516961
ENST00000504781
Nonsense mediated decay
Chr.5: 177514938 - 177516324
ENST00000505081
Retained intron
Chr.5: 177511578 - 177516950
ENST00000506965
Processed transcript
Chr.5: 177515022 - 177516950
ENST00000507955
Nonsense mediated decay
Chr.5: 177511577 - 177516945
ENST00000509576
Nonsense mediated decay
Chr.5: 177514981 - 177516950
ENST00000510171
Nonsense mediated decay
Chr.5: 177515772 - 177516961
ENST00000512431
Retained intron
Chr.5: 177514929 - 177516935
ENST00000515562
Retained intron
Chr.5: 177515341 - 177516895
ENST00000629036
Protein coding
Chr.5: 177515305 - 177516945
ENST00000650742
Retained intron
Chr.5: 177512103 - 177516879
ENST00000652618
Retained intron
Chr.5: 177511628 - 177516638
ENST00000652623
Retained intron
Chr.5: 177511638 - 177516934