Assay name​
HS_SNF8_1473614 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for SNF8
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 10 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
SNF8
Gene aliases​
EAP30;VPS22;Dot3
Species​
Homo sapiens
Main target​
ENST00000504000
Exons numbers​
1-2
Ensembl exons ids​
ENSE00002069649;ENSE00002054500
Amplicon start​
1612
Amplicon length​
83
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000290330
Protein coding
CCDS82156
NM_001317192
Chr.17: 48930374 - 48944810
ENST00000502492
Protein coding
CCDS11541
NM_001317193;NM_007241;NM_001317194
Chr.17: 48929316 - 48945117
ENST00000504000
Retained intron
Chr.17: 48930390 - 48933318
ENST00000509989
Nonsense mediated decay
Chr.17: 48930426 - 48937054
ENST00000509995
Nonsense mediated decay
Chr.17: 48930371 - 48944733
ENST00000510558
Nonsense mediated decay
Chr.17: 48930371 - 48944806
ENST00000514089
Processed transcript
Chr.17: 48930381 - 48937118
ENST00000515572
Retained intron
Chr.17: 48930388 - 48933591
ENST00000573795
Nonsense mediated decay
Chr.17: 48930429 - 48944811
ENST00000576353
Nonsense mediated decay
Chr.17: 48930504 - 48944825