Assay name​
HS_SH2D1A_1481262 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for SH2D1A
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
SH2D1A
Gene aliases​
XLP;MTCP1;DSHP;XLPD;EBVS;SAP;IMD5;LYP
Species​
Homo sapiens
Main target​
ENST00000371139
Exons numbers​
3-4
Ensembl exons ids​
ENSE00003605162;ENSE00001917567
Amplicon start​
579
Amplicon length​
102
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000360027
Protein coding
CCDS48162
NM_001114937
Chr.X: 124346525 - 124371488
ENST00000371139
Protein coding
CCDS14608
NM_002351
Chr.X: 124346344 - 124373155
ENST00000477673
Protein coding
Chr.X: 124346589 - 124371488
ENST00000491950
Processed transcript
Chr.X: 124346589 - 124371488
ENST00000494073
Processed transcript
Chr.X: 124346589 - 124371488
ENST00000635645
Processed transcript
Chr.X: 124227868 - 124373197
ENST00000647259
Nonsense mediated decay
Chr.X: 124346391 - 124372845