Assay name
HS_CAPN1_1491091 QuantiNova LNA PCR Assay
Assay specification
Best coverage assay for CAPN1
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Assay targets 8 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay in Focus Panel
Gene symbol
CAPN1
Gene aliases
muCANP;muCL;CANP;CANPL1
Species
Homo sapiens
Main target
ENST00000526954
Exons numbers
5-6
Ensembl exons ids
ENSE00001273856;ENSE00003573355
Amplicon start
585
Amplicon length
67
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000279247
Protein coding
CCDS44644
NM_005186
Chr.11: 65181872 - 65212005
ENST00000524773
Protein coding
CCDS44644
NM_001198869
Chr.11: 65181745 - 65212001
ENST00000526468
Protein coding
Chr.11: 65183336 - 65188000
ENST00000526954
Nonsense mediated decay
Chr.11: 65182000 - 65188019
ENST00000527323
Protein coding
CCDS44644
Chr.11: 65182462 - 65211987
ENST00000527897
Retained intron
Chr.11: 65185932 - 65187686
ENST00000533129
Protein coding
CCDS44644
Chr.11: 65181733 - 65211858
ENST00000533820
Protein coding
CCDS44644
NM_001198868
Chr.11: 65181194 - 65212006