Assay name​
HS_SH3TC1_1503634 QuantiNova LNA PCR Assay
Assay specification​
Best coverage assay for SH3TC1
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Assay targets 7 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR.
Gene symbol​
SH3TC1
Gene aliases​
FLJ20356
Species​
Homo sapiens
Main target​
ENST00000506360
Exons numbers​
10-11
Ensembl exons ids​
ENSE00003674921;ENSE00003694721
Amplicon start​
1277
Amplicon length​
85
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000245105
Protein coding
CCDS3399
NM_001318480;NM_018986
Chr.4: 8199290 - 8241103
ENST00000502669
Nonsense mediated decay
Chr.4: 8199304 - 8240735
ENST00000506360
Retained intron
Chr.4: 8199303 - 8240744
ENST00000508438
Retained intron
Chr.4: 8225015 - 8227273
ENST00000509553
Retained intron
Chr.4: 8225156 - 8227545
ENST00000514274
Processed transcript
Chr.4: 8224596 - 8227469
ENST00000515682
Nonsense mediated decay
Chr.4: 8199371 - 8241091