Assay name
HS_KDM5C_1550827 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for KDM5C
Best transcript assay for ENST00000375401
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000375401
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
KDM5C
Gene aliases
DXS1272E;XE169;SMCX;JARID1C;MRX13
Species
Homo sapiens
Main target
ENST00000375401
Exons numbers
10-11
Ensembl exons ids
ENSE00000860404;ENSE00001614347
Amplicon start
1825
Amplicon length
120
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000375379
Protein coding
CCDS87747
NM_001353982;NM_001353981;NM_001353984;NM_001353978
Chr.X: 53192929 - 53225422
ENST00000375383
Protein coding
Chr.X: 53192929 - 53225422
ENST00000375401
Protein coding
CCDS14351
NM_004187
Chr.X: 53192152 - 53225422
ENST00000404049
Protein coding
CCDS65269
NM_001353979;NM_001282622
Chr.X: 53192257 - 53225176
ENST00000452825
Protein coding
CCDS55417
NM_001146702
Chr.X: 53191321 - 53225422
ENST00000497100
Retained intron
Chr.X: 53198490 - 53211658