Assay name
HS_TP53BP1_1588285 QuantiNova LNA PCR Assay
Wet-lab validated
qPCR wet-lab validated
Assay specification
Best coverage assay for TP53BP1
Best transcript assay for ENST00000263801
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Best transcript assay for ENST00000263801
Assay targets 6 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol
TP53BP1
Gene aliases
53BP1;p202;TDRD30
Species
Homo sapiens
Main target
ENST00000263801
Exons numbers
17-18
Ensembl exons ids
ENSE00003545052;ENSE00003634218
Amplicon start
3864
Amplicon length
118
Assay targets
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000263801
Protein coding
CCDS10096
NM_005657;NM_001355001
Chr.15: 43407209 - 43510614
ENST00000382039
Protein coding
Chr.15: 43407214 - 43493105
ENST00000382044
Protein coding
CCDS45250
NM_001141980
Chr.15: 43403061 - 43493171
ENST00000411772
Nonsense mediated decay
Chr.15: 43407214 - 43456331
ENST00000450115
Protein coding
CCDS45251
NM_001141979
Chr.15: 43407216 - 43493127
ENST00000572085
Retained intron
Chr.15: 43415222 - 43493156