Assay name​
HS_VEGFA_1664135 QuantiNova LNA PCR Assay
Wet-lab validated​
qPCR wet-lab validated
Assay specification​
Best coverage assay for VEGFA
Assay targets 29 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Assay targets 29 transcripts
Assay spans exon
Pre-designed assay for dPCR and qPCR. Wet-lab validated for qPCR.
Assay in Focus Panel
Gene symbol​
VEGFA
Gene aliases​
VEGF-A;VPF;VEGF
Species​
Homo sapiens
Main target​
ENST00000425836
Exons numbers​
2-3
Ensembl exons ids​
ENSE00003650678;ENSE00003595535
Amplicon start​
645
Amplicon length​
65
Assay targets​
Transcript Ensembl Id
Bio Type
Ccds
Ref Seq
Chromosome Location
ENST00000230480
Protein coding
CCDS69125
NM_001287044
Chr.6: 43771992 - 43784935
ENST00000324450
Protein coding
CCDS55007
NM_001171622
Chr.6: 43770707 - 43784562
ENST00000372055
Protein coding
CCDS34457
NM_001025366
Chr.6: 43770707 - 43784609
ENST00000372064
Protein coding
CCDS47434
NM_001025370
Chr.6: 43770707 - 43786487
ENST00000372067
Protein coding
CCDS34458
NM_001025368
Chr.6: 43770213 - 43786487
ENST00000372077
Protein coding
CCDS55014
NM_001171628
Chr.6: 43770782 - 43786487
ENST00000413642
Protein coding
CCDS47433
NM_001025367
Chr.6: 43770707 - 43784589
ENST00000417285
Protein coding
CCDS47435
NM_001025369
Chr.6: 43770707 - 43784562
ENST00000425836
Protein coding
CCDS4907
NM_003376
Chr.6: 43770707 - 43784949
ENST00000457104
Protein coding
CCDS55015
NM_001171630
Chr.6: 43771247 - 43784562
ENST00000476772
Retained intron
Chr.6: 43770184 - 43778764
ENST00000482630
Protein coding
CCDS47432
NM_001033756
Chr.6: 43770707 - 43784658
ENST00000512683
Retained intron
Chr.6: 43771247 - 43777825
ENST00000518538
Retained intron
Chr.6: 43771153 - 43778937
ENST00000518689
Protein coding
CCDS55008
NM_001171625
Chr.6: 43771247 - 43784562
ENST00000518824
Protein coding
CCDS55013
NM_001171629
Chr.6: 43771247 - 43784658
ENST00000519767
Protein coding
NM_001204384;NM_001204385
Chr.6: 43770793 - 43784562
ENST00000520265
Protein coding
Chr.6: 43774353 - 43784562
ENST00000520948
Protein coding
CCDS55009
NM_001171624
Chr.6: 43771083 - 43784949
ENST00000523125
Protein coding
CCDS55011
NM_001171627
Chr.6: 43771247 - 43784562
ENST00000523873
Protein coding
CCDS55010
NM_001171623
Chr.6: 43771209 - 43784609
ENST00000523950
Protein coding
CCDS55012
NM_001171626;NM_001317010
Chr.6: 43771209 - 43784902
ENST00000611736
Protein coding
CCDS34457
Chr.6: 43770707 - 43784562
ENST00000615393
Protein coding
CCDS47434
Chr.6: 43770707 - 43784562
ENST00000617771
Protein coding
CCDS47432
Chr.6: 43770707 - 43784628
ENST00000621747
Protein coding
CCDS34458
Chr.6: 43770707 - 43784562
ENST00000640482
Protein coding
CCDS47435
Chr.6: 43770707 - 43784546
ENST00000640499
Protein coding
CCDS4907
Chr.6: 43770707 - 43784562
ENST00000640653
Protein coding
CCDS47433
Chr.6: 43770707 - 43784562